Article-Journal

Computational assignment of cell-cycle stage from single-cell transcriptome data

Antonio Scialdone, Kedar N. Natarajan, Luis R. Saraiva, Valentina Proserpio, Sarah A. Teichmann, Oliver Stegle, John C. Marioni, Florian Buettner

Decoding the regulatory network of early blood development from single-cell gene expression measurements

Victoria Moignard, Steven Woodhouse, Laleh Haghverdi, Andrew J. Lilly, Yosuke Tanaka, Adam C. Wilkinson, Florian Buettner, Iain C. Macaulay, Wajid Jawaid, Evangelia Diamanti

Diffusion maps for high-dimensional single-cell analysis of differentiation data

Laleh Haghverdi, Florian Buettner, Fabian J. Theis

Effects of high-dose oral insulin on immune responses in children at high risk for type 1 diabetes: the Pre-POINT randomized clinical trial

Ezio Bonifacio, Anette-G. Ziegler, Georgeanna Klingensmith, Edith Schober, Polly J. Bingley, Marietta Rottenkolber, Anke Theil, Anne Eugster, Ramona Puff, Claudia Peplow

RAMONA: a Web application for gene set analysis on multilevel omics data

Steffen Sass, Florian Buettner, Nikola S. Mueller, Fabian J. Theis

Single-cell transcriptomic reconstruction reveals cell cycle and multi-lineage differentiation defects in Bcl11a-deficient hematopoietic stem cells

Jason CH Tsang, Yong Yu, Shannon Burke, Florian Buettner, Cui Wang, Aleksandra A. Kolodziejczyk, Sarah A. Teichmann, Liming Lu, Pentao Liu

Feature ranking of type 1 diabetes susceptibility genes improves prediction of type 1 diabetes

Christiane Winkler, Jan Krumsiek, Florian Buettner, Christof Angermüller, Eleni Z. Giannopoulou, Fabian J. Theis, Anette-Gabriele Ziegler, Ezio Bonifacio

Molecular phenotypic profiling of a Saccharomyces cerevisiae strain at the single-cell level

A. Mareike Schmidt, Stephan R. Fagerer, Konstantins Jefimovs, Florian Buettner, Christian Marro, Erdem C. Siringil, Karl L. Boehlen, Martin Pabst, Alfredo J. Ibáñez

Probabilistic PCA of censored data: accounting for uncertainties in the visualization of high-throughput single-cell qPCR data

Florian Buettner, Victoria Moignard, Berthold Göttgens, Fabian J. Theis

Two non-parametric methods for derivation of constraints from radiotherapy dose–histogram data

M. A. Ebert, S. L. Gulliford, F. Buettner, Kerwyn Foo, A. Haworth, A. Kennedy, D. J. Joseph, J. W. Denham