Article-Journal

cgcorrect: a method to correct for confounding cell–cell variation due to cell growth in single-cell transcriptomics

Thomas Blasi, Florian Buettner, Michael K. Strasser, Carsten Marr, Fabian J. Theis

f-scLVM: scalable and versatile factor analysis for single-cell RNA-seq

Florian Buettner, Naruemon Pratanwanich, Davis J. McCarthy, John C. Marioni, Oliver Stegle

Non-targeted metabolomic approach reveals two distinct types of metabolic responses to telomerase dysfunction in S. cerevisiae

Florian Buettner, Kyle Jay, Harry Wischnewski, Thomas Stadelmann, Shady Saad, Konstantins Jefimovs, Madina Mansurova, Juan Gerez, Claus M. Azzalin, Reinhard Dechant

Parotid gland mean dose as a xerostomia predictor in low-dose domains

Hubert Szymon Gabryś, Florian Buettner, Florian Sterzing, Henrik Hauswald, Mark Bangert

Prospective identification of hematopoietic lineage choice by deep learning

Felix Buggenthin, Florian Buettner, Philipp S. Hoppe, Max Endele, Manuel Kroiss, Michael Strasser, Michael Schwarzfischer, Dirk Loeffler, Konstantinos D. Kokkaliaris, Oliver Hilsenbeck

Vitamin A-retinoic acid signaling regulates hematopoietic stem cell dormancy

Nina Cabezas-Wallscheid, Florian Buettner, Pia Sommerkamp, Daniel Klimmeck, Luisa Ladel, Frederic B. Thalheimer, Daniel Pastor-Flores, Leticia P. Roma, Simon Renders, Petra Zeisberger

destiny: diffusion maps for large-scale single-cell data in R

Philipp Angerer, Laleh Haghverdi, Maren Büttner, Fabian J. Theis, Carsten Marr, Florian Buettner

Unbiased prediction and feature selection in high-dimensional survival regression

Michael Laimighofer, J. A. N. Krumsiek, Florian Buettner, Fabian J. Theis

Combined single-cell functional and gene expression analysis resolves heterogeneity within stem cell populations

Nicola K. Wilson, David G. Kent, Florian Buettner, Mona Shehata, Iain C. Macaulay, Fernando J. Calero-Nieto, Manuel Sánchez Castillo, Caroline A. Oedekoven, Evangelia Diamanti, Reiner Schulte

Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells

Florian Buettner, Kedar N. Natarajan, F. Paolo Casale, Valentina Proserpio, Antonio Scialdone, Fabian J. Theis, Sarah A. Teichmann, John C. Marioni, Oliver Stegle